QB25 Group Projects

Here is a sampling of projects that students have undertaken from years past. This should give you an idea of the types of topics and scope that we are looking for in the small-group projects.

• Clustering of cell types measured by RNA-seq and correlation of MERFISH measurement with RNA-seq measurements GitHub Slides
• Comparison of metagenomic analysis tools GitHub Slides
• Profiling of Gene Function using pooled CRISPR Screens GitHub Slides
• Analyzing the changes in stress marker expression in aging C.elegans GitHub Slides
• Transcriptomic Cross-Tissue Analysis of Key Developmental Genes in Zebrafish GitHub Slides
• Comparing gut flora diversity between Japanese Centenarians and Obese Amish population GitHub
• Bin Sizes in Micro-C Contact Maps in Drosophila Melanogaster GitHub Slides
• A method for data analysis from Single-molecule tracking outputs using proximity-assisted photoactivation in live cells GitHub Slides
• Investigating autism gene orthologs GitHub Slides
• Comparative Analysis of Alternative Splicing across Human Tissues Using GTEx RNA-Seq Data GitHub
• Exploring the Differential Expression of Genes during Oogenesis in C. elegans GitHub Slides
• The venom-gland transcriptome of Hypsiglena GitHub Slides
• Using the PathoFact pipeline to predict bacterial virulence GitHub Slides