Assignment Date: Friday, Oct. 11, 2024
Due Date: Friday, Oct. 21, 2024
As always, before you do anything else, create a week5 directory in your qbb2024-answers directory for this assignment, and create a README.md file in that week5 directory. This is where you will be putting and uploading all of your code/plots/etc. for this assignment.
We would recommend creating a livecoding directory within your week5 directory, and putting your live-coding scripts and data there. You can add the livecoding directory to your .gitignore so that git won’t track these files.
Wherever you choose to do your live-coding, you can download the following file: https://raw.githubusercontent.com/bxlab/cmdb-quantbio/refs/heads/main/assignments/lab/bulk_RNA-seq_part1/extra_data/bulkRnaSeqData.tar.gz
This file contains the data you’ll need for the live-coding exercises. Once downloaded, unzip it with the following command:
tar -xvzf bulkRnaSeqData.tar.gz
Complete the homework assignment in your week5 submission directory in your qbb2024-answers.